Definition

Isomapis a non-linear dimensional reduction method that aims to preserve the intrinsic geometry of high-dimensional data in a lower-dimensional space. The main idea of isomap is to approximate the geodesic distances between data points on a manifold, rather than just using straight-line Euclidean distances.

Algorithm

  1. Determine the neighbors of each point
    • All points in some fixed radius
    • k-nearest neighbors
  2. Construct a neighborhood distnace graph
  3. Compute the shortest path between two nodes with Dijkstra’s algorithm.